Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926911.1_cds_XP_016474843.1_66830
CDS Infomation

[gene=LOC107796563] [db_xref=GeneID:107796563] [protein=polygalacturonase-2-like] [protein_id=XP_016474843.1] [location=complement(join(20462..20680,21280..21396,21552..21660,22656..22737,22856..23063,23323..23343,23456..23623,23724..23855,24516..24833))] [gbkey=CDS]
Sequence

ATGGCAGTGCAAAGGATTCTTTTTTTGTTCACCATTATTTTTTTAGTTCTATCAAATTCA
TCATGTAACGGAAGCTTCAATGAGGATAATGAAAATGATGATTTTTTCATATCAGCTGAT
CACAACATGAATCTAAAACAAGAATTTGGTCATGATTTTCAAGCTTACCCTTCTTATTTG
AGCACCATTACTGAATACGACAAATTTCAAAGTCGAATTCATGGTTTCAATAATATTGAA
GAAGTTGCCAATAGGGTTGCATTTATTGATGTAAGTAAATTTGGAGCTAAGGGTGATGGA
GTTACAGATGATACTACGGCATTTGAGAAAGCTTGGAAAGAAGCATGTTCATCTAACACA
CCTGTGCTCTTTGTGGTGCTACACAACAAGAATTATCTTCTGAAACAAATCACATTTTCA
GGTCCATGCAAATCTTCCATTTCAATGCAGATATTTGGATCTTTAGAAGCATCAGATAAT
ATATCGGACTATAGTAAAGATAGAAGGCATTGGATTCTTTTTAATAATGTTCAAAACTTG
GTTGTTGGAGGAGGAGGAGTTATCAATGGCAATGGAAAAATATGGTGGCAAAATTCTTGC
AAAATCAATAAATCTCTGCCATGCAAGAATGCACCAACGGGCTTAACCTTCTACAATTGC
AAGAATTTGAAAGTGAAGAACCTTAAGATTAAAGATGCACAACAAATTCATGTCTCATTT
GAGAGATGTACTAATGTTGAAGCTTCAAATTTGATGGTGACTGCTCCAGAAATTAGCCCT
AACACTGATGGAATCCATGTAGCAAATACTCAAAATATCCAAATTTCTGACTCTATCATT
GGAACAGGTGATGATTGTATTTCAATTGCGAGTGGATCCCAAAAGGTGCAGGCCACGGAT
ATTACTTGTGGTCCAGGTCATGGTATCAGTATTGGAAGCTTAGGATCAGGGAATTCAGAA
GCTCATGTGTCTGATGTTATTGTGAGTAGAGCCAAGCTTTCTGGTACTACAAATGGACTT
AGGATCAAGACTTGGCAGGGAGGATCTGGAAATGCGAGCAACATCATATTTCAAAATGTG
GAAATGCAAGGAGTAAAGAACCCCATAATCATAGACCAAAATTATTGTGATCAACATGAT
CCATGCAAACAACATAGTTCGGCAGTTCAAGTGAAAAATATTGTCTATCAGAACATCATA
GGTTCAAGTGCAACGAATGTGGCCATAAATTTTAATTGCAGCAAAAGCTTTCCATGTGAA
GGTATTGTAATGCAGAATATAAATTTGGTAGGGGAAGGTGGAACTGCAAAGGCTATTTGC
AGTAATGTCGAATTCAGCAATATTATTGGAACTGTCTCACCACATTGCCCATGA

Peptide Sequence

PEP ID

XP_016474843.1
PEP Infomation

PREDICTED: polygalacturonase-2-like [Nicotiana tabacum]
Sequence

MAVQRILFLFTIIFLVLSNSSCNGSFNEDNENDDFFISADHNMNLKQEFGHDFQAYPSYL
STITEYDKFQSRIHGFNNIEEVANRVAFIDVSKFGAKGDGVTDDTTAFEKAWKEACSSNT
PVLFVVLHNKNYLLKQITFSGPCKSSISMQIFGSLEASDNISDYSKDRRHWILFNNVQNL
VVGGGGVINGNGKIWWQNSCKINKSLPCKNAPTGLTFYNCKNLKVKNLKIKDAQQIHVSF
ERCTNVEASNLMVTAPEISPNTDGIHVANTQNIQISDSIIGTGDDCISIASGSQKVQATD
ITCGPGHGISIGSLGSGNSEAHVSDVIVSRAKLSGTTNGLRIKTWQGGSGNASNIIFQNV
EMQGVKNPIIIDQNYCDQHDPCKQHSSAVQVKNIVYQNIIGSSATNVAINFNCSKSFPCE
GIVMQNINLVGEGGTAKAICSNVEFSNIIGTVSPHCP

Transcript Sequence

Gene sequence data has not been registered.